Talk:Microarray databases - Revision history

Harryboyles: /* top */ removing unsupported parameters in WikiProject banners

2024-05-19T02:05:05Z

top: removing unsupported parameters in WikiProject banners

← Previous revision		Revision as of 02:05, 19 May 2024
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	{{WikiProject banner shell\|class=List\|		{{WikiProject banner shell\|class=List\|
	{{WikiProject Molecular Biology\|COMPBIO=yes\|COMPBIO-importance=mid~~\|regsys=y~~}}		{{WikiProject Molecular Biology\|COMPBIO=yes\|COMPBIO-importance=mid}}
	}}		}}
	== References ==		== References ==

Cewbot: Maintain {{WPBS}} and vital articles: 1 WikiProject template. Create {{WPBS}}. Keep majority rating "List" in {{WPBS}}. Remove 1 same rating as {{WPBS}} in {{WikiProject Molecular Biology}}.

2024-02-06T04:52:00Z

Maintain {{WPBS}} and vital articles: 1 WikiProject template. Create {{WPBS}}. Keep majority rating "List" in {{WPBS}}. Remove 1 same rating as {{WPBS}} in {{WikiProject Molecular Biology}}.

← Previous revision		Revision as of 04:52, 6 February 2024
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	{{WikiProject ~~Molecular~~ ~~Biology~~\|class=~~list~~\|~~COMPBIO=yes\|COMPBIO-importance=mid\|regsys=y}}~~		{{WikiProject banner shell\|class=List\|
			{{WikiProject Molecular Biology\|COMPBIO=yes\|COMPBIO-importance=mid\|regsys=y}}
			}}
	== References ==		== References ==
	Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.		Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.

PrimeBOT: /* top */Task 24: combining WikiProject banners following a TFD

2022-07-15T19:16:08Z

top: Task 24: combining WikiProject banners following a TFD

← Previous revision		Revision as of 19:16, 15 July 2022
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	{{WikiProject ~~Computational~~ Biology\|class=list\|importance=mid\|regsys=y}}		{{WikiProject Molecular Biology\|class=list\|COMPBIO=yes\|COMPBIO-importance=mid\|regsys=y}}
	== References ==		== References ==
	Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.		Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.

Amkilpatrick: + WP:REGSYS

2019-05-12T17:17:13Z

+ WP:REGSYS

← Previous revision		Revision as of 17:17, 12 May 2019
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	{{WikiProject Computational Biology\|class=list\|importance=mid}}		{{WikiProject Computational Biology\|class=list\|importance=mid\|regsys=y}}
	== References ==		== References ==
	Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.		Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.

Alexbateman: Added CB template and assessed

2011-06-10T17:25:36Z

Added CB template and assessed

← Previous revision		Revision as of 17:25, 10 June 2011
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			{{WikiProject Computational Biology\|class=list\|importance=mid}}
	== References ==		== References ==
	Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.		Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.

Jethero: /* References */ signing talk page

2008-06-22T19:53:42Z

References: signing talk page

← Previous revision		Revision as of 19:53, 22 June 2008
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	# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}		# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}
	# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}		# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}
			-- [[User:Jethero\|Jethero]]<sup>[[User_Talk:Jethero\|Talk]]</sup> 19:53, 22 June 2008 (UTC)

Jethero: /* References */ using Template:PMID instead of Template:Entrez Pubmed

2008-06-22T19:53:27Z

References: using Template:PMID instead of Template:Entrez Pubmed

← Previous revision		Revision as of 19:53, 22 June 2008
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	'''Database and sharing'''		'''Database and sharing'''
	# Anderle P, Duval M, Draghici S, Kuklin A, Littlejohn TG, Medrano JF, Vilanova D, Roberts MA. Gene expression databases and data mining. Biotechniques. 2003 Mar;Suppl:36-44. {{~~Entrez Pubmed~~\|12664683}}		# Anderle P, Duval M, Draghici S, Kuklin A, Littlejohn TG, Medrano JF, Vilanova D, Roberts MA. Gene expression databases and data mining. Biotechniques. 2003 Mar;Suppl:36-44. {{PMID\|12664683}}
	# Sherlock G, Ball CA. Microarray databases: storage and retrieval of microarray data. Methods Mol Biol. 2003;224:235-48. {{~~Entrez Pubmed~~\|12710676}}		# Sherlock G, Ball CA. Microarray databases: storage and retrieval of microarray data. Methods Mol Biol. 2003;224:235-48. {{PMID\|12710676}}
	# Miles MF. Microarrays: lost in a storm of data? Nat Rev Neurosci. 2001 Jun;2(6):441-3. {{~~Entrez Pubmed~~\|11389479}}		# Miles MF. Microarrays: lost in a storm of data? Nat Rev Neurosci. 2001 Jun;2(6):441-3. {{PMID\|11389479}}
	# Becker KG. The sharing of cDNA microarray data. Nat Rev Neurosci. 2001 Jun;2(6):438-40. {{~~Entrez Pubmed~~\|11389478}}		# Becker KG. The sharing of cDNA microarray data. Nat Rev Neurosci. 2001 Jun;2(6):438-40. {{PMID\|11389478}}
	# Geschwind DH. Sharing gene expression data: an array of options. Nat Rev Neurosci. 2001 Jun;2(6):435-8. {{~~Entrez Pubmed~~\|11389477}}		# Geschwind DH. Sharing gene expression data: an array of options. Nat Rev Neurosci. 2001 Jun;2(6):435-8. {{PMID\|11389477}}
	# Gardiner-Garden M, Littlejohn TG. A comparison of microarray databases. Brief Bioinform. 2001 May;2(2):143-58. {{~~Entrez Pubmed~~\|11465732}}		# Gardiner-Garden M, Littlejohn TG. A comparison of microarray databases. Brief Bioinform. 2001 May;2(2):143-58. {{PMID\|11465732}}

	'''Standardization'''		'''Standardization'''
	# Stoeckert CJ, Causton HC, Ball CA. Microarray databases: standards and ontologies. Nat Genet. 2002 Dec;32 Suppl 2:469-73. {{~~Entrez Pubmed~~\|12454640}}		# Stoeckert CJ, Causton HC, Ball CA. Microarray databases: standards and ontologies. Nat Genet. 2002 Dec;32 Suppl 2:469-73. {{PMID\|12454640}}
	# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{~~Entrez Pubmed~~\|12225585}}		# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}
	# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{~~Entrez Pubmed~~\|11726920}}		# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}

Jethero: add pubmed references

2008-06-22T19:37:37Z

add pubmed references

New page

== References ==
Borrowing these references, from this page: [http://ihome.cuhk.edu.hk/~b400559/arraysoft_public.html]. Please check and incorporate into article if relevant.

'''Database and sharing'''
# Anderle P, Duval M, Draghici S, Kuklin A, Littlejohn TG, Medrano JF, Vilanova D, Roberts MA. Gene expression databases and data mining. Biotechniques. 2003 Mar;Suppl:36-44. {{Entrez Pubmed|12664683}}
# Sherlock G, Ball CA. Microarray databases: storage and retrieval of microarray data. Methods Mol Biol. 2003;224:235-48. {{Entrez Pubmed|12710676}}
# Miles MF. Microarrays: lost in a storm of data? Nat Rev Neurosci. 2001 Jun;2(6):441-3. {{Entrez Pubmed|11389479}}
# Becker KG. The sharing of cDNA microarray data. Nat Rev Neurosci. 2001 Jun;2(6):438-40. {{Entrez Pubmed|11389478}}
# Geschwind DH. Sharing gene expression data: an array of options. Nat Rev Neurosci. 2001 Jun;2(6):435-8. {{Entrez Pubmed|11389477}}
# Gardiner-Garden M, Littlejohn TG. A comparison of microarray databases. Brief Bioinform. 2001 May;2(2):143-58. {{Entrez Pubmed|11465732}}

'''Standardization'''
# Stoeckert CJ, Causton HC, Ball CA. Microarray databases: standards and ontologies. Nat Genet. 2002 Dec;32 Suppl 2:469-73. {{Entrez Pubmed|12454640}}
# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{Entrez Pubmed|12225585}}
# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{Entrez Pubmed|11726920}}

← Previous revision		Revision as of 19:53, 22 June 2008
Line 14:		Line 14:
	# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}		# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}
	# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}		# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}
			-- [[User:Jethero\|Jethero]]<sup>[[User_Talk:Jethero\|Talk]]</sup> 19:53, 22 June 2008 (UTC)

← Previous revision		Revision as of 19:53, 22 June 2008
Line 3:		Line 3:

	'''Database and sharing'''		'''Database and sharing'''
	# Anderle P, Duval M, Draghici S, Kuklin A, Littlejohn TG, Medrano JF, Vilanova D, Roberts MA. Gene expression databases and data mining. Biotechniques. 2003 Mar;Suppl:36-44. {{~~Entrez Pubmed~~\|12664683}}		# Anderle P, Duval M, Draghici S, Kuklin A, Littlejohn TG, Medrano JF, Vilanova D, Roberts MA. Gene expression databases and data mining. Biotechniques. 2003 Mar;Suppl:36-44. {{PMID\|12664683}}
	# Sherlock G, Ball CA. Microarray databases: storage and retrieval of microarray data. Methods Mol Biol. 2003;224:235-48. {{~~Entrez Pubmed~~\|12710676}}		# Sherlock G, Ball CA. Microarray databases: storage and retrieval of microarray data. Methods Mol Biol. 2003;224:235-48. {{PMID\|12710676}}
	# Miles MF. Microarrays: lost in a storm of data? Nat Rev Neurosci. 2001 Jun;2(6):441-3. {{~~Entrez Pubmed~~\|11389479}}		# Miles MF. Microarrays: lost in a storm of data? Nat Rev Neurosci. 2001 Jun;2(6):441-3. {{PMID\|11389479}}
	# Becker KG. The sharing of cDNA microarray data. Nat Rev Neurosci. 2001 Jun;2(6):438-40. {{~~Entrez Pubmed~~\|11389478}}		# Becker KG. The sharing of cDNA microarray data. Nat Rev Neurosci. 2001 Jun;2(6):438-40. {{PMID\|11389478}}
	# Geschwind DH. Sharing gene expression data: an array of options. Nat Rev Neurosci. 2001 Jun;2(6):435-8. {{~~Entrez Pubmed~~\|11389477}}		# Geschwind DH. Sharing gene expression data: an array of options. Nat Rev Neurosci. 2001 Jun;2(6):435-8. {{PMID\|11389477}}
	# Gardiner-Garden M, Littlejohn TG. A comparison of microarray databases. Brief Bioinform. 2001 May;2(2):143-58. {{~~Entrez Pubmed~~\|11465732}}		# Gardiner-Garden M, Littlejohn TG. A comparison of microarray databases. Brief Bioinform. 2001 May;2(2):143-58. {{PMID\|11465732}}

	'''Standardization'''		'''Standardization'''
	# Stoeckert CJ, Causton HC, Ball CA. Microarray databases: standards and ontologies. Nat Genet. 2002 Dec;32 Suppl 2:469-73. {{~~Entrez Pubmed~~\|12454640}}		# Stoeckert CJ, Causton HC, Ball CA. Microarray databases: standards and ontologies. Nat Genet. 2002 Dec;32 Suppl 2:469-73. {{PMID\|12454640}}
	# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{~~Entrez Pubmed~~\|12225585}}		# Spellman PT, Miller M, Stewart J, Troup C, Sarkans U, Chervitz S, Bernhart D, Sherlock G, Ball C, Lepage M, Swiatek M, Marks WL, Goncalves J, Markel S, Iordan D, Shojatalab M, Pizarro A, White J, Hubley R, Deutsch E, Senger M, Aronow BJ, Robinson A, Bassett D, Stoeckert CJ Jr, Brazma A. Design and implementation of microarray gene expression markup language (MAGE-ML). Genome Biol. 2002 Aug 23;3(9):RESEARCH0046. {{PMID\|12225585}}
	# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{~~Entrez Pubmed~~\|11726920}}		# Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet. 2001 Dec;29(4):365-71. {{PMID\|11726920}}